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PUBLICATIONS
Edited Books
- Gungor A, Aydin N, Karahoca A, and Toklu Ç, Proceedings of
E-Learning '07 Conference, 2007, Bahcesehir University Publications,
Istanbul, TR. ISBN 978-975-6437-75-9
- Arslan T, Stoica A, Suess M, Keymeulen D, Higuchi T,
Magness R, Aydin N, Erdogan AT, Proceedings - 2007 NASA/ESA Conference
on Adaptive Hardware and Systems, 2007, IEEE Computer Soc., ISBN
0-7695-2866-X
- Stoica A, Arslan T, Suess M, Yalçın S, Keymeulen D, Higuchi
T, Zebulum R, Aydin N, Proceedings - First NASA/ESA Conference on
Adaptive Hardware and Systems, 2006, IEEE Computer Soc., ISBN
0-7695-2614-4
Book Chapters
- Chrysostomou C, Seker H, Aydin N, "Investigation into the
Effects of an Individual Amino Acid on Protein Function by Means of a
Resonant Recognition Model," Lecture Notes in Computer Science, Volume
6935, Convergence and Hybrid Information Technology, pp. 229-236, 2011.
ISBN 978-3-642-24105-5
- Serbes G, Şakar CO, Aydin N, Kahya YP, "Effect of Different
Window and Wavelet Types on the Performance of a Novel Crackle
Detection Algorithm," Lecture Notes in Computer Science, Volume 6935,
Convergence and Hybrid Information Technology, pp. 575-581, 2011. ISBN
978-3-642-24105-5.
- Karahoca A, Karahoca D, and Aydin N, "Benchmarking the Data
Mining Algorithms with Adaptive Neuro-Fuzzy Inference System in GSM
Churn Management," in Data Mining and Knowledge Discovery in Real Life
Applications, Ed: Ponce J and Karahoca A, In-Tech Press, Vienna, pp.
438-451, 2009, ISBN 978-3-902613-53-0
- Aydin N, "Venous Air Embolism: Detection via Wavelet
Transform," In Wiley Encyclopedia of Biomedical Engineering , Ed: Metin
Akay, John Wiley & Sons, Inc., Hoboken, 2006, ISBN 978-0-471-24967-2
- Aydin N, "Time-frequency and time-scale analysis of embolic
signals". In Mathematics of Signal Processing V, Ed: Mcwhirter JG and
Proudler IK, Oxford University Press, Oxford, pp. 241-254, 2002, ISBN:
9780198507345
Journal Publications
- Kirtac K, Aydin N, Lavanchy JL, Beldi G, Smit M, Woods MS,
Aspart F. Surgical Phase Recognition: From Public Datasets to
Real-World Data. Applied Sciences. 2022; 12(17):8746.
https://doi.org/10.3390/app12178746
- KAZMA, COŞKUN; LEVENT, VECDİ EMRE; ÇARDAK, MERVE; and
AYDIN, NİZAMETTİN (2022) "Design and implementation of a low cost and
portable tactile stimulator," Turkish Journal of Electrical Engineering
and Computer Sciences: Vol. 30: No. 6, Article 26.
https://doi.org/10.55730/1300-0632.3946
- Ilhan, H.O., Serbes, G. & Aydin, N. Decision and
feature level fusion of deep features extracted from public COVID-19
data-sets. Appl Intell 52, 8551–8571 (2022).
https://doi.org/10.1007/s10489-021-02945-8
- Sajjad Nematzadeh, Farzad Kiani, Mahsa Torkamanian-Afshar,
Nizamettin Aydin, Tuning hyperparameters of machine learning algorithms
and deep neural networks using metaheuristics: A bioinformatics study
on biomedical and biological cases, Computational Biology and
Chemistry, Volume 97, 2022, 107619, ISSN 1476-9271
- Betul Erdogdu Sakar, Gorkem Serbes, Nizamettin Aydin,
Emboli detection using a wrapper-based feature selection algorithm with
multiple classifiers, Biomedical Signal Processing and Control, Volume
71, Part A, 2022, 103080, ISSN 1746-8094.
- Hamza Osman Ilhan, Mecit Yuzkat, Nizamettin Aydin, Sperm
Motility Analysis by using Recursive Kalman Filters with the smartphone
based data acquisition and reporting approach, Expert Systems with
Applications, Volume 186, 2021, 115774, ISSN 0957-4174,
https://doi.org/10.1016/j.eswa.2021.115774.
- Lanjanian H, Nematzadeh S, Hosseini S, Torkamanian-Afshar
M, Kiani F, Moazzam-Jazi M, Aydin N, Masoudi-Nejad A, "High-throughput
analysis of the interactions between viral proteins and host cell
RNAs", Computers in Biology and Medicine, Volume 135, 2021, 104611,
ISSN 0010-4825, https://doi.org/10.1016/j.compbiomed.2021.104611.
- Mecit Yüzkat, Hamza Osman Ilhan, Nizamettin
Aydin, Multi-model CNN fusion for sperm morphology analysis, Computers
in Biology and Medicine, Volume 137, 2021, 104790, ISSN 0010-4825,https://doi.org/10.1016/j.compbiomed.2021.104790.
- YÜZKAT M, İLHAN HO, Aydin N. Effects of Color Space
Transformations on Classification Performance of Sperm Morphology.
Avrupa Bilim ve Teknoloji Dergisi. 2021(29):70-5.
- Ilhan
H. O., Serbes G., Aydin N., "Automated sperm morphology analysis
approach using a directional masking technique", Computers in Biology
and Medicine, Volume 122,2020, 103845, ISSN 0010-4825, https://doi.org/10.1016/j.compbiomed.2020.103845.
- Ilhan, H.O., Sigirci, I.O., Serbes, G. et al. "A fully
automated hybrid human sperm detection and classification system based
on mobile-net and the performance comparison with conventional methods".
Med Biol Eng Comput 58, 1047–1068 (2020).
https://doi.org/10.1007/s11517-019-02101-y
- Elbir A., Aydin N., Music genre classification and
music recommendation by using deep learning. Electronics Letters,
56(12), 627 – 629, 2020.DOI: 10.1049/el.2019.4202.
- Batur Dinler Ö, Aydin N, "An Optimal Feature Parameter Set
Based on Gated Recurrent Unit Recurrent Neural Networks for Speech
Segment Detection", Applied Sciences, 10(4):1273,2020.
- Ilhan H.O. & Aydin N. “Smartphone based sperm counting
- an alternative way to the visual assessment technique in sperm
concentration analysis”, Multimed Tools Appl, 79 (9), 6409-6435, 2019.
- Pashaei E, Pashaei E, & Aydin N, “Gene selection using
hybrid binary black hole algorithm and modified binary particle swarm
optimization”, Genomics, 111, 669-686, 2019
- Elbir A., İlhan H. O., Serbes G., Aydin N., The
Implementation of Optimization Methods for Contrast Enhancement.
International Journal of Computer Systems Science and Engineering,
34(2), 2019.
- İlhan H. O., Serbes G., Aydin N., Automatic directional
masking technique for better sperm morphology segmentation and
classification analysis. Electronics Letters, 55 (5), 256-258, 2019.
- Dinler Ö. B., Aydin N., Kurdish recognition system digit. The Online Journal of Science and Technology, 8(1), 101, 2018
- Dinler Ö. B., Aydin N., Extraction of the acoustic features
of semi-vowels in the Kurdish language. The Online Journal of Science
and Technology-April, 8(2), 2018
- Pashaei E, Aydin N, “Markovian encoding models in human
splice site recognition using SVM”, Computational Biology and
Chemistry, Vol. 73, 159-170, 2018
- Ilhan HO, Aydin N, “A novel data acquisition and analyzing
approach to spermiogram tests”, Biomedical Signal Processing and
Control, Vol. 41129-139, 2018
- Wei Y, Avcı C, Liu J, Belezamo B, Aydin N, Li P, Zhou X,
“Dynamic programming-based multi-vehicle longitudinal trajectory
optimization with simplified car following models”, Transportation
Research Part B: Methodological, Vol. 106, 102-129, 2017
- Pashaei E, Pashaei E, Ahmady M, Ozen M, Aydin N,
“Meta-analysis of miRNA expression profiles for prostate cancer
recurrence following radical prostatectomy”, PloS one, Vol. 12(6),
1-23, 2017
- Pashaei E, Aydin N, “Binary black hole algorithm for
feature selection and classification on biological data”, Applied Soft
Computing, Vol. 56, 94-106, 2017
- Tapkın TP, Osman O, Ergin T, Teomete U, Dandin Ö, Aydın N.
Assesment of similarities between liver images to each other using
scaling, rotation, and translation geometrical operations. IU-JEEE,
2017, Vol.17(1), 3101-3106, 2017
- Altay G, Kurt Z, Altay N, Aydin N. DepEst: an R package of
important dependency estimators for gene network inference algorithms.
bioRxiv. Jan 1:102871, 2017
- Pashaei, E., Ozen, M. & Aydin, N. Splice site
identification in human genome using random forest. Health Technol. 7:
141. doi:10.1007/s12553-016-0157-z , 2017
- Pashaei E, Guzel E, Ozgurses ME, Demirel G, Aydin N, Ozen
M, “A Meta-Analysis: Identification of Common Mir-145 Target Genes that
have Similar Behavior in Different GEO Datasets”, PloS one, Vol. 11(9),
1-14, 2016
- Canbay F, Levent VE, Serbes G, Ugurdag HF, Goren S, Aydin
N. Code generator for implementing dual tree complex wavelet transform
on reconfigurable architectures for mobile applications. Healthcare
Technology Letters. Sep 22;3(3):184-8, 2016
- Yavuz ZK, Aydin N, Altay G,. “Comprehensive review of
association estimators for the inference of gene networks”, Turk J Elec
Eng & Comp Sci, Vol. 24(3), 695-718, 2016
- Serbes G, Gulcur HO, Aydin N, “Directional dual-tree
complex wavelet packet transforms for processing quadrature signals”,
Medical & biological engineering & computing, Vol. 54(2-3),
295-313, 2016
- Serbes G, Sakar BE, Gulcur HO, Aydin N, “An emboli
detection system based on Dual Tree Complex Wavelet Transform and
ensemble learning”, Applied Soft Computing, Vol. 37, 87-94, 2015
- Sevil M, Elalmış N, Görgün H, Aydin N. Control of air
conditioning with fuzzy logic controller design for smart home systems.
Sigma. 33(3):439-63, 2015
- Chrysostomou C, Seker H, Aydin N, “CISAPS: complex
informational spectrum for the analysis of protein sequences”, Advances
in Bioinformatics, Vol 2015, 1-10, 2015
- Kurt Z, Aydin N, Altay G, “A comprehensive comparison of
association estimators for gene network inference algorithms”,
Bioinformatics, Vol. 30(15), 2142-2149, 2014
- Sakar CO, Kursun O, Seker H, Gurgen F, Aydin N, Favorov O,
“Combining multiple views: Case studies on protein and arrhythmia
features”, Engineering Applications of Artificial Intelligence,
Vol. 28, 174-180, 2014
- Serbes G, Aydin N, “Denoising performance of modified
dual-tree complex wavelet transform for processing quadrature embolic
Doppler signals”, Medical & biological engineering & computing,
Vol. 52(1), 29-43, 2014
- Serbes G, Sakar CO, Kahya YP, Aydin N, “Pulmonary crackle
detection using time–frequency and time–scale analysis”, Digital Signal
Processing, Vol. 23(3), 1012-1021, 2013
- Serbes G, Aydin N, “Modified dual tree complex wavelet
transform for processing quadrature signals”, Biomedical Signal
Processing and Control, Vol. 6(3), 301-306, 2011
- Kursun O, Sakar C O, Favorov O, Aydin N, Gurgen F, "Using
covariates for improving the minimum Redundancy Maximum Relevance
feature selection method", Turk J Elec Eng & Comp Sci, Vol.18(4),
2010
- Bale K, Chapman P, Barraclough N, Purdy J, Aydin N, and
Dark P, "Kaleidomaps: a new technique for the visualization of
multivariate time-series ". Information Visualization, Vol. 6; No. 2,
155-167, 2007.
- Temel T, Morgul A, Aydin N, "Signed higher-radix full-adder
algorithm and implementation with current-mode multi-valued logic
circuits ", IEE Proc-Circuits Devices Syst, Vol. 153(5), 489-496, 2006
- Aydin N, Arslan T, Cumming DRS, "Direct Sequence
Spread-spectrum Communication System for Integrated Sensor
Microsystems", IEEE Trans Inf Tech Biomed, 9(1), 4-12, 2005
- Aydin N, Marvasti F, Markus HS, "Embolic Doppler ultrasound
signal detection using discrete wavelet transform", IEEE Trans Inf Tech
Biomed, 8(2), 182-190, 2004
- Seker H, Evans DH, Aydin N, Yazgan E, "Compensatory fuzzy
neural network based intelligent detection of abnormal neonatal
cerebral Doppler ultrasound waveforms", IEEE Trans Inf Tech Biomed,
5(3), 187-194, 2001
- Aydin N, Markus HS, "Time-scale analysis of quadrature
Doppler ultrasound signals", IEE Proceedings - Science, Measurement and
Technology, 148(1), 15-22, 2001
- Aydin N, Markus HS, "Optimisation of processing parameters
for the analysis and detection of embolic signals". European Journal of
Ultrasound. 12, 1, 69-79, 2000
- Aydin N, "Time varying filtering approach for simulation of
ultrasonic Doppler signals". Journal of Computer Simulation &
Modelling in Medicine. 1, 1, 67-76, 2000
- Aydin N, Markus HS, "Directional wavelet transform in the
context of complex quadrature Doppler signals", IEEE Signal Processing
Letters, 10(7), 278-280, 2000
- Aydin N, Padayachee S, Markus HS, "The use of the wavelet
transform to describe embolic signals". Ultrasound Med Biol. 25(6),
953-958, 1999
- Moraes R, Aydin N, Evans DH, "The performance of three
maximum frequency envelope detection algorithms for Doppler signals".
Journal of Vascular Investigation. 1, 3, 126-134, 1995
- Aydin N, Evans DH, "A computerised arterial graft monitoring system". Journal of Vascular Investigation. 1, 2, 68-74, 1995
- Aydin N, Fan L, Evans DH, "Quadrature-to-directional format
conversion of Doppler signals using digital methods", Physiol Meas, 15,
181-199, 1994
- Aydin N, Evans DH, "Implementation of directional Doppler
techniques using a digital signal processor", Med Biol Eng Comput, 32,
S157-S164, 1994
Conference Publications
- Y.
Atahan, A. Elbir, A. Enes Keskin, O. Kiraz, B. Kirval and N. Aydin,
"Music Genre Classification Using Acoustic Features and Autoencoders,"
2021 Innovations in Intelligent Systems and Applications Conference
(ASYU), 2021, pp. 1-5, doi: 10.1109/ASYU52992.2021.9598979.
- M. Yüzkat, H. O. Ilhan and N. Aydın, "Morphological
Classification of Low Quality Sperm Images Using Deep Learning
Networks," 2020 Medical Technologies Congress (TIPTEKNO), 2020, pp.
1-4, doi: 10.1109/TIPTEKNO50054.2020.9299318.
- Pashaei E., Pashaei E., Aydin N. (2021) Hybrid Krill Herd
Algorithm with Particle Swarm Optimization for Image Enhancement. In:
Kahraman C., Cevik Onar S., Oztaysi B., Sari I., Cebi S., Tolga A.
(eds) Intelligent and Fuzzy Techniques: Smart and Innovative Solutions.
INFUS 2020. Advances in Intelligent Systems and Computing, vol 1197.
Springer, Cham. https://doi.org/10.1007/978-3-030-51156-2_166
- Kazma
C, Levent VE, Aydin N. (2019, July). Design and Development of a New
Tactile Stimulator. In 2019 NASA/ESA Conference on Adaptive Hardware
and Systems (AHS) (pp. 55-60), IEEE.
- Elbir A, Çam HB, Iyican ME, Öztürk B, Aydin N. (2018,
October). Music Genre Classification and Recommendation by Using
Machine Learning Techniques. In 2018 Innovations in Intelligent Systems
and Applications Conference (ASYU) (pp. 1-5). IEEE.
- Elbir, A., İlhan, H. O., Serbes, G., & Aydın, N. (2018,
April). Short Time Fourier Transform based music genre classification.
In 2018 Electric Electronics, Computer Science, Biomedical
Engineerings' Meeting (EBBT) (pp. 1-4). IEEE.
- Ilhan HO, Sigirci IO, Serbes G, Aydin N. (2018,
September). The Effect of Nonlinear Wavelet Transform Based De-noising
in Sperm Abnormality Classification. In 2018 3rd International
Conference on Computer Science and Engineering (UBMK) (pp. 658-661).
IEEE.
- Ilhan HO, Serbes G, Aydin N. (2018, July). The effects of
the modified overlapping group shrinkage technique on the sperm
segmentation in the stained images. In 2018 41st International
Conference on Telecommunications and Signal Processing (TSP) (pp. 1-4).
IEEE.
- Ilhan HO, Serbes G, Aydin N. (2018, July). Dual Tree
Complex Wavelet Transform Based Sperm Abnormality Classification. In
2018 41st International Conference on Telecommunications and Signal
Processing (TSP) (pp. 1-5). IEEE.
- Elbir A, İlhan, HO, Serbes G, & Aydin N. (2018, April).
Short Time Fourier Transform based music genre classification. In 2018
Electric Electronics, Computer Science, Biomedical Engineerings'
Meeting (EBBT) (pp. 1-4). IEEE.
- Çam, H. B., Akçakoca, S., Elbir, A., Ilhan, H. O., &
Aydın, N. (2018, April). The performance evaluation of the Cat and
Particle Swarm Optimization Techniques in the image enhancement. In
2018 Electric Electronics, Computer Science, Biomedical Engineerings'
Meeting (EBBT) (pp. 1-4). IEEE.
- Serbes G, Aydin N. Resonance based pre-processing method
for eliminating artifacts in Doppler ultrasound signals. In Signal
Processing and Communications Applications Conference (SIU), 2017 25th
2017 May 15 (pp. 1-4). IEEE.
- Tarhan, H. H., & Aydin, N. (2017, October). Copying
case detection with data mining. In Computer Science and Engineering
(UBMK), 2017 International Conference on (pp. 430-434). IEEE.
- İlhan, H. O., & Aydin, N. (2017, September). The
contribution of DSP integration to ARM cores in SBCs for the video
decoding process. In 2017 IEEE International Conference on Power,
Control, Signals and Instrumentation Engineering (ICPCSI) (pp.
3128-3131). IEEE.
- Kazma, C., & Aydin, N. (2017, September). A
microcontroller based system for measuring the central neural system
response. In 2017 IEEE International Conference on Power, Control,
Signals and Instrumentation Engineering (ICPCSI) (pp. 320-324). IEEE.
- Kaleli, F., & Aydin, N. (2017, September). Object
detection on deformable surfaces using local feature sets. In 2017 IEEE
International Conference on Power, Control, Signals and Instrumentation
Engineering (ICPCSI) (pp. 185-189). IEEE.
- Palabas T, Osman O, Ergin T, Teomete U, Dandin O, Aydin N.
Karaciǧer görüntülerinin geometrik dönüşüm yöntemleri kullanilarak
benzerliklerinin deǧerlendirilmesi. In 2016 Medical Technologies
National Conference, TIPTEKNO 2016 2017 Feb 23. IEEE.
- Pashaei E, Yilmaz A, Aydin N. A combined SVM and Markov
model approach for splice site identification. In 6th International
Conference on Computer and Knowledge Engineering (ICCKE), 2016 (pp. 200
- 204). IEEE.
- Pashaei E, Ozen M, Aydin N. Biomarker discovery based on
BBHA and AdaboostM1 on microarray data for cancer classification. In
Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th
Annual International Conference of the 2016 Oct 18 (pp. 3080-3083).
IEEE.
- Pashaei E, Yilmaz A, Ozen M, Aydin N. A novel method for
splice sites prediction using sequence component and hidden Markov
model. In Engineering in Medicine and Biology Society (EMBC), 2016 IEEE
38th Annual International Conference of the 2016 Oct 18 (pp.
3076-3079). IEEE.
- Serbes G, Aydin N. Analysis of embolic signals with
directional dual tree rational dilation wavelet transform. In
Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th
Annual International Conference of the 2016 Oct 18 (pp. 3821-3824).
IEEE.
- Pashaei E, Ozen M, Aydin N. Splice sites prediction of
human genome using AdaBoost. In2016 IEEE-EMBS International Conference
on Biomedical and Health Informatics (BHI) 2016 Feb 24 (pp. 300-303).
IEEE.
- Pashaei E, Ozen M, Aydin N. Gene selection and
classification approach for microarray data based on Random Forest
Ranking and BBHA. In2016 IEEE-EMBS International Conference on
Biomedical and Health Informatics (BHI) 2016 Feb 24 (pp. 308-311). IEEE.
- Palabaş T, Osman O, Ergin T, Teomete U, Dandin Ö, Aydın N.
Determining the right abdomen region border for the injured liver
segmentation. In Electric Electronics, Computer Science, Biomedical
Engineerings' Meeting (EBBT), 2016 Apr 26 (pp. 1-4). IEEE.
- Pashaei E, Ozen M, Aydin N. Random Forest in Splice Site
Prediction of Human Genome. InXIV Mediterranean Conference on Medical
and Biological Engineering and Computing, 2016 (pp. 518-523). Springer.
DOI: 10.1007/978-3-319-32703-7_100
- Canbay F, Levent VE, Serbes G, Ugurdag HF, Goren S, Aydin
N. A Multi-channel Real Time Implementation of Dual Tree Complex
Wavelet Transform in Field Programmable Gate Arrays. InXIV
Mediterranean Conference on Medical and Biological Engineering and
Computing, 2016 (pp. 114-118). Springer.
- Pashaei E, Ozen M, Aydin N. An application of black hole
algorithm and decision tree for medical problem. In Bioinformatics and
Bioengineering (BIBE), 2015 IEEE 15th International Conference on 2015
Nov 2 (pp. 1-6). IEEE.
- Canbay F, Levent VE, Serbes G, Ugurdag HF, Goren S, Aydin
N. An area efficient real time implementation of dual tree complex
wavelet transform in field programmable gate arrays. In Bioinformatics
and Bioengineering (BIBE), 2015 IEEE 15th International Conference on
2015 Nov 2 (pp. 1-5). IEEE.
- Serbes G, Sakar BE, Aydin N. A micro emboli vs non-emboli
classification system based on the directional dual tree rational
dilation wavelet transform. In Bioinformatics and Bioengineering
(BIBE), 2015 IEEE 15th International Conference on 2015 Nov 2 (pp.
1-5). IEEE.
- Pashaei E, Ozen M, Aydin N. Improving medical diagnosis
reliability using Boosted C5. 0 decision tree empowered by Particle
Swarm Optimization. In 2015 37th Annual International Conference of the
IEEE Engineering in Medicine and Biology Society (EMBC) 2015 Aug 25
(pp. 7230-7233). IEEE.
- Serbes G, Gulcur HO, Aydin N. Directional dual-tree
rational-dilation complex wavelet transform. In 2014 36th Annual
International Conference of the IEEE Engineering in Medicine and
Biology Society 2014 Aug 26 (pp. 1465-1468). IEEE.
- Serbes G, Gulcur HO, Aydin N. Symmetrical directional
dual-tree complex wavelet packet transform. In2014 36th Annual
International Conference of the IEEE Engineering in Medicine and
Biology Society 2014 Aug 26 (pp. 820-823). IEEE.
- Kurt, Z.; Aydin, N.; Altay, G., "Influence of the Copula
Transform on the Association Estimators for Gene Network Inference”,
International Conference on Applied Informatics for Health and Life
Sciences AIHLS 2013, Istanbul, Turkiye
- Kurt, Z.; Aydin, N.; Altay, G., "Impacts of the different
spline orders on the B-spline association estimator," Bioinformatics
and Bioengineering (BIBE), 2013 IEEE 13th International Conference on ,
vol., no., pp.1,6, 10-13 Nov. 2013 , doi: 10.1109/BIBE.2013.6701663
- Gençer M, Bilgin G, Aydin N. Embolic Doppler ultrasound
signal detection via fractional Fourier transform. In2013 35th Annual
International Conference of the IEEE Engineering in Medicine and
Biology Society (EMBC) 2013 Jul 3 (pp. 3050-3053). IEEE.
- Serbes, G.; Aydin, N.; Gulcur, H.O., "Directional dual-tree
complex wavelet packet transform," Engineering in Medicine and Biology
Society (EMBC), 2013 35th Annual International Conference of the IEEE ,
vol., no., pp.3046,3049, 3-7 July 2013, doi: 10.1109/EMBC.2013.6610183
- Serbes, G.; Sakar, C.O.; Kahya, Y.; Aydin, N., "Pulmonary
crackle detection using time-frequency analysis," Signal Processing and
Communications Applications Conference (SIU), 2012 20th , vol., no.,
pp.1,4, 18-20 April 2012, doi: 10.1109/SIU.2012.6204591
- Serbes, G. ; Aydin, N., "Embolic Doppler ultrasound signal
detection using modified dual tree complex wavelet transform,"
Biomedical and Health Informatics (BHI), 2012 IEEE-EMBS International
Conference on, pp. 945 - 947, 5-7 Jan. 2012.
- Serbes, G., Şakar, C. O., Aydin, N., Kahya, Y. P., "
Feature Extraction Using Time-Frequency/Scale Analysis and Ensemble of
Feature Sets for Crackle Detection," Engineering in Medicine and
Biology Society (EMBC), 2011 Annual International Conference of the
IEEE , vol., no., pp. 3314- 3314, Aug. 30 2011-Sept. 3 2011.
- Serbes, G., Aydin, N., " Symmetrical Modified Dual Tree
Complex Wavelet Transform for Processing Quadrature Doppler Ultrasound
Signals," Engineering in Medicine and Biology Society (EMBC), 2011
Annual International Conference of the IEEE , vol., no., pp. 4816-
4819, Aug. 30 2011-Sept. 3 2011.
- Chrysostomou, C., Seker, H., Aydin, N., " Effects of
windowing and zero-padding on Complex Resonant Recognition Model for
protein sequence analysis," Engineering in Medicine and Biology Society
(EMBC), 2011 Annual International Conference of the IEEE, vol., no.,
pp. 4955- 4958, Aug. 30 2011-Sept. 3 2011.
- Serbes, G., Aydin, N., "Denoising performance of modified
dual tree complex wavelet transform," Information Technology and
Applications in Biomedicine (ITAB), 2010 10th IEEE International
Conference on , vol., no., pp.1-4, 3-5 Nov. 2010.
- Chrysostomou, C., Seker, H., Aydin, N., Haris, P.I.,
"Complex Resonant Recognition Model in analysing Influenza a virus
subtype protein sequences," Information Technology and Applications in
Biomedicine (ITAB), 2010 10th IEEE International Conference on , vol.,
no., pp.1-4, 3-5 Nov. 2010.
- Serbes, G.; Aydin, N.; , "Denoising embolic Doppler
ultrasound signals using Dual Tree Complex Discrete Wavelet Transform,"
Engineering in Medicine and Biology Society (EMBC), 2010 Annual
International Conference of the IEEE , vol., no., pp.1840-1843, Aug. 31
2010-Sept. 4 2010.
- Orun, A.B.; Aydin, N.; , "Variable optimisation of medical
image data by the learning Bayesian Network reasoning," Engineering in
Medicine and Biology Society (EMBC), 2010 Annual International
Conference of the IEEE , vol., no., pp.4554-4557, Aug. 31 2010-Sept. 4
2010.
- Sakar CO, Kursun O, Seker H, Gurgen F, Aydin N, Favorov OV,
"Parallel interacting multiview learning: An application to prediction
of protein sub-nuclear location," Information Technology and
Applications in Biomedicine, 2009. ITAB 2009. 9th International
Conference on, vol., no., pp.1-4, 4-7 Nov. 2009.
- Serbes G, Aydin N, "A complex discrete wavelet transform
for processing quadrature Doppler ultrasound signals," Information
Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th
International Conference on, vol., no., pp.1-4, 4-7 Nov. 2009.
- Aydin N, Arslan T, "Review of Communication Systems for
Ingestible Miniaturized Integrated Sensor Microsystems," Advanced
Technologies for Enhanced Quality of Life, 2009. AT-EQUAL '09. , vol.,
no., pp.91-95, 22-26 July 2009.
- Yang Z, Karahoca A, Yang N, Aydin N, "Network intrusion
detection by using cellular neural network with tabu search". ECSIS
Symposium on Bio-inspired, Learning, and Intelligent Systems for
Security (BLISS-2008), Edinburgh, August 2008
- Aydin N, Arslan T, "Analysis and Optimization of a Wireless
Communication System for an Ingestable Sensor Microsystem". Frontiers
in the Convergence of Bioscience and Information Technologies (FBIT
2007), Jeju Island, October 2007.
- Karahoca A, Aydin N, "Benchmarking of Data Mining
Techniques for Emboli Detection". Frontiers in the Convergence of
Bioscience and Information Technologies (FBIT 2007), Jeju Island,
October 2007.
- Karahoca A, Aydin N, "GSM Churn Management Using and
Adaptive Neuro-Fuzzy Inference System". International Conference on
Intelligent Pervasive Computing (IPC 2007), Jeju Island, October 2007.
- Karahoca A, Karahoca D, Yengin İ, Aydin N, Güngör A,
"Usability Evaluation of a Meta-Cognitive Tool". e-Learning conference
'07, Istanbul, August 2007.
- Karahoca A, Karahoca D, Ince IF, Gökçeli R, Aydın N, Güngör
A, " Intelligent Question Classification for e-learning by ANFIS ".
e-Learning conference '07, Istanbul, August 2007.
- Salman YB, Karahoca A, Kim JY, Aydin N, Güngör A , "
A Research Study: Mobile Learning in South Korea ". e-Learning
conference '07, Istanbul, August 2007.
- Aydin N, "DWT Based Adaptive Threshold Determination in
Embolic Signal Detection ". Proc. NASA/ESA Conference on Adaptive
Hardware and Systems (AHS-2007), Edinburgh, August 2007.
- Temel T, Aydin N, "A threshold free clustering algorithm
for robust, unsupervised classification ". ECSIS Symposium on
Bio-inspired, Learning, and Intelligent Systems for Security
(BLISS-2007), Edinburgh, August 2007
- Karahoca A, Kucur T, Aydin N, "Data Mining Usage in Emboli
Detection". ECSIS Symposium on Bio-inspired, Learning, and Intelligent
Systems for Security (BLISS-2007), Edinburgh, August 2007
- Kaleli F, Aydin N, Ertas G, Gulcur HO, "An Adaptive
Approach to the Segmentation of DCE-MR Images of the Breast: Comparison
with Classical Thresholding Algorithms", IEEE Symposium on
Computational Intelligence in Image and Signal Processing (CIISP 2007),
1-5 April 2007 Page(s):375 – 379.
- Temel T, Aydin N, "A novel information-theoretic clustering
algorithm for robust, unsupervised classification". 9th International
Symposium on Signal Processing and Its Applications (ISSPA2007),
Sharjah, February, 2007.
- Aydin N, "Processing of Complex Quadrature Signals". ECSIS
Symposium on Intelligent Systems for Defense and Security (ISDS), Iasi,
September 2006.
- Kaleli F, Aydin N, "A Region based thresholding Algorithm
for Segmenting of Axial MR Breast Images ". Europian Conference on
Intelligent Systems and Technologies (ECIT 2006), Iasi, September 2006.
- Bale K, Chapman P, Purdy J, Aydin N, Dark P, "Kaleidomap
Visualizations of Cardiovascular Function in Critical Care Medicine".
International Conference on Medical Information
Visualisation--BioMedical Visualisation (MedVis'06), 51-58, 2006.
- Aydin N, "Choice of Wavelet Function in Detection of
Embolic Signals Using Discrete Wavelet Transform ". Proc. 5th Annual
IEEE EMBS Special Topic Conference on Information Technology
Applications in Biomedicine (ITAB2006), Ioannina, September 2006.
- Aydin N, Arslan T, "Power Driven Reconfigurable Complex
Continuous Wavelet Transform". Proc. 1st NASA/ESA Conference on
Adaptive Hardware and Systems (AHS-2006), Istanbul, 109 – 113, June 2006
- Wang L, Aydin N, Astaras A, Ahmadian M, Hammond PA,
Tang TB, Johannessen E, Arslan T, Beaumont SP, "A Sensor System on Chip
for Wireless Microsystems". IEEE 2006 International Symposium on
Circuits and Systems (ISCAS 206), Kos, May 2006.
- Revett K, Aydin N, "Attribute Extraction and Classification
Using Rough Sets on a Lymphoma Dataset". Proc. International Symposium
on Health Informatics and Bioinformatics (HIBIT 2005), Antalya, 93-97,
November 2005.
- Aydin N, "A Fourier Domain Method for Recovering SSB
Signals from Baseband Equivalents". Proc. 9th International
Research/Expert Conference - Trends in The Development of Machinery and
Associated Technologies (TMT 2005), Antalya, 1483-1486, September 2005.
- Aydin N, "Complex Wavelet Transform for Processing Complex
Quadrature Doppler Signals". Proc. International Workshop on
Applications of Wavelets to Real World Problems(IWW 2005), Istanbul,
221-232, July 2005.
- Pai A, Khawam S, Aydin N, Arslan T, Benkrid K, "A 2-D
systolic motion estimation architecture on a domain-specific
reconfigurable substrate ". Irish Signals and Systems Conference
(ISSC'04), Belfast, June-July 2004.
- Temel T, Morgul A, Aydin N, "A novel signed higher-radix
full-adder algorithm and implementation with current-mode multi-valued
logic circuits". IEEE Euromicro Symposium on Digital System Design,
Paris, 80-87, September 2004.
- Khawam S, Baloch S, Pai A, Ahmed I, Aydin N, Arslan T,
Westall F, “Efficient Implementations of Mobile Video Computations on
Domain-Specific Reconfigurable Arrays ". Design, Automation and Test in
Europe Conference (DATE 04), Paris, 1230-1235, February 2004.
- Aydin N, Astaras A, Wang L, Arslan T, Murray AF, Beamont
SP, Cumming DRS, “Design and implementation considerations for an
advanced wireless interface in miniaturized integrated sensor
microsystems". 25th Annual International Conference of the IEEE
Engineering in Medicine and Biology Society, Cancun, 3400-3402,
September 2003.
- Aydin N, Arslan T, Cumming DRS, "The design of optimized
programmable transmitter and receiver architectures for an integrated
sensor microsystem". 16th Annual IEEE International ASIC/SOC
Conference, Portland, 71-74, September 2003.
- Aydin N, Arslan T, Cumming DRS, "Power/area analysis and
optimization of a DS-SS receiver for an integrated sensor microsystem".
IEEE Euromicro Symposium on Digital System Design, Antalya, 402-408,
September 2003.
- Aydin N, "Frequency and Scale Domain Analysis of Complex
Quadrature Embolic Doppler Ultrasound Signals". IEEE 3rd International
Symposium on Image and Signal Processing and Analysis, Rome, 888-891,
September 2003.
- Aydin N, Arslan T, Murray AF, "Identification and Detection
of Embolic Doppler Signals Using DWT and Fuzzy Logic". Proc.
International Fuzzy systems World Congress (IFSA 2003), Istanbul,
119-122, June 2003.
- Aydin N, Arslan T, Cumming DRS, "Direct sequence CDMA based
wireless interface for an integrated sensor microsystem". Proc. 4th
Annual IEEE EMBS Special Topic Conference on Information Technology
Applications in Biomedicine (ITAB2003), Birmingham, 370-373, April 2003.
- Astaras A, Ahmadian M, Aydin N, Cui L, Johannessen E, Tang
TB, Wang L, Arslan T, Beaumont SP, Flynn BW, Murray AF, Reid SW, Yam P,
Cooper JM, and Cumming DRS, "A miniature integrated electronics sensor
capsule for real-time monitoring of the gastrointestinal tract
(IDEAS)". Proc. of the IEEE ICBME Conference, Singapore, December 2002.
- Johannessen EA, Tang TB, Wang L, Cui L, Ahmadian M, Aydin
N, Astaras A, Murray AF, Flynn BW, Arslan T, Beaumont SP, Cumming DRS,
and Cooper JM, "An ingestible electronic pill for real time analytical
measurements of the gastrointestinal tract". Proc.of the mTAS 2002
Symposium, Japan, 181-183, 2002.
- Aydin N, Arslan T, Cumming DRS, "Design and implementation
of a spread spectrum based communication system for an ingestible
capsule". Proc. 24th Annual International Conference of the IEEE
Engineering in Medicine and Biology Society, Houston, 1773-1774, 2002.
- Aydin N, Marvasti F, Markus HS, "Effect of wavelet
denoising on time-frequency and time-scale analysis of quadrature
embolic signals". Proc. 24th Annual International Conference of the
IEEE Engineering in Medicine and Biology Society, Houston, 80-81, 2002.
- Aydin N, Purdy J, Dark P, "Localizing systolic ejection
within a trans-esophageal CW Doppler ultrasound aortovelographic
vaweform". Proc. 24th Annual International Conference of the IEEE
Engineering in Medicine and Biology Society, Houston, 1315-1316, 2002.
- Aydin N, Arslan T, Cumming DRS, "A spread spectrum based
communication system for an integrated sensor microsystem". Proc. 15th
Annual IEEE International ASIC/SOC Conference, Rochester, 336-340,
2002.
- Aydin N, Marvasti F, Markus HS, "Detection and estimation
of embolic Doppler signals using discrete wavelet transform". Proc.
IEEE ICASSP 2001, Salt Lake City, 1049-1052, 2001.
- Seker H, Evans DH, Yazgan E, Aydin N, Naguip RG,
"Intelligent detection of abnormal neonatal cerebral haemodynamics in a
neonatal intensive care environment". Proc. 23rd Annual International
Conference of the IEEE Engineering in Medicine and Biology Society,
Istanbul, 1612 -1614, 2001.
- Aydin N, Markus HS, "Time-frequency and time-scale analysis
of embolic signals". Proc. 5th IMA International Conference on
Mathematics in Signal Processing, Warwick, December 2000.
- Aydin N, Markus HS, "A comparison of time-frequency and
time-scale analysis of embolic signals". Proc. 14TH International
Conference on Systems Engineering (ICSE 2000), Coventry, 28-30, 2000.
- Aydin N, Markus HS, "Optimisation of processing parameters
for the analysis and detection of embolic signals". Proc. 14TH
International Conference on Systems Engineering (ICSE 2000), Coventry,
31-35, 2000.
- Aydin N, Markus HS, "Wavelet analysis of quadrature Doppler
ultrasound signals". Proc. IEE International Conference on Medical
Signal and Information Processing (MEDSIP '2000). Bristol, 251-256,
2000.
- Aydin N, Markus HS, "The use of the wavelet transform to
describe embolic signals". Cerebrovasc Dis. 9, supl. 2, S7, 1999.
European Society of Neurosonology and Cerebral Hemodynamics 4th
Meeting, Venice, April 1999.
- Aydin N, Markus HS, "Analysis of low intensity embolic
signals using wavelet transform". Proc. 3rd International Workshop on
Biosignal Interpretation (BSI99), Chicago, 257-260, 1999.
- Aydin N, Markus HS, "Detection of embolic signals using
wavelet transform". Proc. IEEE-EURASIP Workshop on Non-linear Signal
and Image Processing (NSIP’99), vol 2, Antalya, 774-778, 1999.
- Seker H, Aydin N, Yazgan E, "Wavelet based signal
reconstruction for quadrature signals in Doppler ultrasound". Proc. the
IEEE 2nd International Conference, Biomedical Engineering Days,
Istanbul, 60-61, May 1998.
- Aydin N, Evans DH, "A fast frequency domain algorithm for
decoding quadrature Doppler signals". Proc. 18th Annual International
Conference of the IEEE Engineering in Medicine and Biology Society,
Amsterdam, vol 18, 993-994, 1996.
- Evans DH, Aydin N, Thrush AJ and Nydahl S, "A computerised
arterial graft monitoring system". Proc. 5th International Conference
on Biomedical Engineering, Singapore, 294-296, December 1994.
- Serbes G, Şakar CO, Kahya Y, Aydın N. Pulmonary crackle
detection using time-frequency analysis. In2012 20th Signal Processing
and Communications Applications Conference (SIU) 2012 Apr 18 (pp. 1-4).
IEEE.
- Serbes G, Kocatürk M, Gülçür HÖ, Aydın N. Extracellular
spike detection with resonance based signal decomposition. In2012 20th
Signal Processing and Communications Applications Conference (SIU) 2012
Apr 18 (pp. 1-4). IEEE.
- Serbes, G., Aydin, N., "Denoising embolic Doppler signals
using modified complex discrete wavelet transform," Signal Processing
and Communications Applications (SIU), 2011 IEEE 19th Conference on ,
vol., no., pp.566-569, 20-22 April 2011.
- Ceylan M, Özbay Y, Aydin N, "Kompleks Değerli Yapay Sinir
Ağı Kullanılarak Embolik Doppler Ultrason Sinyallerinin Dedeksiyonu".
Proc. Biyomut 2006, National Biomedical Engineering Meeting, Istanbul,
May 2006.
- Ceylan M, Özbay Y, Aydin N, "Kompleks Değerli Yapay Sinir
Ağı Kullanılarak Doppler Sinyallerinden Yön Bilgisinin Çıkarılması".
Proc. Biyomut 2005, National Biomedical Engineering Meeting, Istanbul,
May 2005.
- Ardogan M, Aydin N, "Simulation of time varying filter
implementation". Proc. IEEE Turkish Chapter Signal Processing and
Applications Conference (SIU'98), Ankara, 519-524, 1998.
- Kisacik M, Aydin N, "Maximum frequency envelope detection
from Doppler ultrasound sonograms". Proc. IEEE Turkish Chapter Signal
Processing and Applications Conference (SIU'98), Ankara, 1998.
- Aydin N, "Decoding directional information encoded in
quadrature signals in frequency domain". Proc. IEEE Turkish Chapter
Signal Processing and Applications Conference (SIU'97), Kusadasi,
190-195, 1997.
- Aydin N, "A geometric method for detection of maximum
frequency envelope". Proc. IEEE Turkish Chapter Signal Processing and
Applications Conference (SIU'97), Kusadasi, 110-114, 1997.
- Aydin N, Gedikbey B, Aydin OB, Ardogan M, "Digital signal
processing methods for decoding quadrature Doppler signals". Proc. IEEE
Turkish Chapter Signal Processing and Applications Conference (SIU
'96), Kemer, 269-274, 1996.
- Aydin N, "Design and implementation of a computerised
arterial graft monitoring system". Proc. Biyomut 95, National
Biomedical Engineering Meeting, Istanbul, 130-133, 1995.
- Aydin N. Advances in Biomedical Signal Processing. AIHLS2013. 2013.
- Astaras A, Ahmadian M, Aydin N, Farooq I, Holgate M ,
Johannessen E, Tang TB, Wang L, Arslan T, Beaumont SP, Casey J, Cooper
JM, Dickman P, Flynn BW, Murray AF, "IDEAS: Miniature Lab-in-a-pill
sensor system", The SET for Britain Conference, 2001.
- Aydin N, Markus HS, "Analysis of low intensity embolic
signals using continuous wavelet transform". St George's Cardiovascular
Research Group 6th Research Open Day, London, October 2000.
- Aydin N, Marvasti F, Markus HS, "Embolic signal detection
and classification using discrete wavelet transform". St George's
Cardiovascular Research Group 6th Research Open Day, London, October
2000.
- Aydin N, Ardogan M, "Time varying filtering approach for
simulation of ultrasonic Doppler signals". Simulation and Modelling
Techniques Applied to Medicine Meeting, London, November 1999.
- Aydin N, Markus HS, "Detection of embolic signals using
wavelet transform". Wavelets: The Key to Intermittent Information,
Discussion Meeting, The ROYAL SOCIETY, London, February 1999.
- Thrush AJ, Aydin N, Nydahl S and Evans DH, "A new on - line
automated system for monitoring lower limb bypass grafts". EURODOP 94,
Oxford, 1994.
PhD Theses:
Computerized Graft Monitoring
Last Updated 17.05.2021
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